{"data_server":"https://primer-monitor.neb.com/igvstatic","organism_slug":"sars-cov-2","organism_name":"SARS-CoV-2","primer_set_display_name":"ARTIC v4.1 (spiked alts)","primer_set_name":"ARTIC_v4.1_(spiked_alts)"}
| Name | Locus | Category | Sequence |
|---|---|---|---|
| SARS-CoV-2_10_LEFT | TCTGCCTATACAGTTGAACTCGGT | ||
| SARS-CoV-2_10_LEFT_alt1 | TTTTGAACTTGATGAAAGGATTGATAAAGTACT | ||
| SARS-CoV-2_10_RIGHT | GAAGATTGGTTAGATGATGATAGTCAA | ||
| SARS-CoV-2_10_RIGHT_alt1 | GCTCTTCAACCTGAAGAAGAG | ||
| SARS-CoV-2_11_LEFT | GAGCCATCAACTCAATATGAGTAT | ||
| SARS-CoV-2_11_RIGHT | AGGAGCCTTAAATAAGGCTACT | ||
| SARS-CoV-2_12_LEFT | GTGGAAGAAGCTAAAAAGGTAA | ||
| SARS-CoV-2_12_RIGHT | ATGTCTACTTAGCTGTCTTTGATAA | ||
| SARS-CoV-2_13_LEFT | TCTACTTGCACCATTATTATCA | ||
| SARS-CoV-2_13_RIGHT | TAGTGACATTGACATCACTTTCTTAA | ||
| SARS-CoV-2_14_LEFT | TAAGTTCCTCACAGAAAACTTGTTAC | ||
| SARS-CoV-2_14_RIGHT | TGCTTGCACATGCAGAAGAAAC | ||
| SARS-CoV-2_15_LEFT | TTTACATTCTACCATCTATTATCTCTA | ||
| SARS-CoV-2_15_RIGHT | TTCTTCACCTGATGCTGTTACAGCG | ||
| SARS-CoV-2_16_LEFT | GGCTTAAATTTGGAAGAAGCTGCTCGGT | ||
| SARS-CoV-2_16_RIGHT | ACGCAAGTTGTGGACATGTCAA | ||
| SARS-CoV-2_17_LEFT | AAGACACTTCTTTCTTTGAGAGAAGTGAGG | ||
| SARS-CoV-2_17_RIGHT | TCCAACAAATAGAGTTGAAGTTTAATCCA | ||
| SARS-CoV-2_18_LEFT | CACAAGTTAATGGTTTAACTTCTATTAAA | ||
| SARS-CoV-2_18_RIGHT | GTGGTAAACAAGCTACAAAATAT | ||
| SARS-CoV-2_19_LEFT | GTACATGGGCACACTTTCTTATG | ||
| SARS-CoV-2_19_RIGHT | ACCCTAAGTTGGACAATTATTATAA | ||
| SARS-CoV-2_1_LEFT | CCAACTTTCGATCTCTTGTAGATCT | ||
| SARS-CoV-2_1_RIGHT | GGCTTAGTAGAAGTTGAAAAAGG | ||
| SARS-CoV-2_20_LEFT | CAGTTACACAACAACCATAAAACCAGT | ||
| SARS-CoV-2_20_RIGHT | CTAATAAAGCCACGTATAAACCAAA | ||
| SARS-CoV-2_21_LEFT | CCTCTTTTAAGAAAGGAGCTAAATTG | ||
| SARS-CoV-2_21_RIGHT | TAGACAATTCTAGTCTTACTATTAAGAAA | ||
| SARS-CoV-2_22_LEFT | TTATACTTAAACCAGCAAATAATAGTTTA | ||
| SARS-CoV-2_22_RIGHT | CTGTTAAGAGTGTCGGTAAATTTTGT | ||
| SARS-CoV-2_23_LEFT | TGTACTAATTATATGCCTTATTTCTTTAC | ||
| SARS-CoV-2_23_RIGHT | GTTTGTCTTAGTGGTTTAGATTCTTT | ||
| SARS-CoV-2_23_RIGHT_alt1 | TCTTAGTGGTTTAGATTCTTTAGACACCT | ||
| SARS-CoV-2_24_LEFT | AAGGCTATTTGAACTCTACTAATGTCA | ||
| SARS-CoV-2_24_RIGHT | AGTTATGTGCATGTTGTAGACGGTTGT | ||
| SARS-CoV-2_25_LEFT | CGATTTCAGCTATGGTTAGAAT | ||
| SARS-CoV-2_25_RIGHT | ATGGTTCCATCCATCTTTACTTT | ||
| SARS-CoV-2_26_LEFT | TGTCACTACAGTTTAAAAGACCA | ||
| SARS-CoV-2_26_RIGHT | CGTACCAATGGAAAAACTCAAAACACTAG | ||
| SARS-CoV-2_27_LEFT | TGATAGTGCGGAAGTTGCAGTT | ||
| SARS-CoV-2_27_RIGHT | AGTCACAACATTGCTTTGATATGGA | ||
| SARS-CoV-2_27_RIGHT_alt1 | AAAAGTCACAACATTGCTTTGATAT | ||
| SARS-CoV-2_28_LEFT | ACACCCCGTGACCTTGGTGCTT | ||
| SARS-CoV-2_28_RIGHT | GATGGTGGTGTCACTCGTGACAT | ||
| SARS-CoV-2_29_LEFT | TTTTTGTTGCTGCTATTTTCTAT | ||
| SARS-CoV-2_29_RIGHT | TTGTGTTTTGGCTGCTGAATGTA | ||
| SARS-CoV-2_2_LEFT | CGCGACGTGCTCGTACGTGG | ||
| SARS-CoV-2_2_RIGHT | ACTGATCCTTATGAAGATTTTC | ||
| SARS-CoV-2_30_LEFT | TTTAGTGCAGTTGGTAACATCTGTT | ||
| SARS-CoV-2_30_RIGHT | TTCTGTGGTGTAGATGCTGTAAA | ||
| SARS-CoV-2_31_LEFT | TCTGTTAGAGTGGTAACAACTTTT | ||
| SARS-CoV-2_31_RIGHT | TAACACCAGTTTACTCATTCTTACCTGGT | ||
| SARS-CoV-2_32_LEFT | TGAATACAGTCATGTAGTTGCCTTTAA | ||
| SARS-CoV-2_32_RIGHT | TGTGCTATTACCTCTTACGCAATA | ||
| SARS-CoV-2_33_LEFT | AGAAGCTGCGCTGTGCACCTTTT | ||
| SARS-CoV-2_33_RIGHT | TTTACTGTCCAAGACATGTGATCTGC | ||
| SARS-CoV-2_34_LEFT | TAAAGTTGAGGGTTGTATGGTAC | ||
| SARS-CoV-2_34_RIGHT | TTAATGGTTCATGTGGTAGTGTTGGT | ||
| SARS-CoV-2_35_LEFT | GTTACAATGGTTCACCATCTGGTGTT | ||
| SARS-CoV-2_35_RIGHT | GACATACTAGGACCTCTTTCTGCTC | ||
| SARS-CoV-2_36_LEFT | ACCACAACTCTTAATGACTTTAACCTTGT | ||
| SARS-CoV-2_36_RIGHT | CTTTTGCTATGGGTATTATTGCTA | ||
| SARS-CoV-2_37_LEFT | GTTGTTACTCACAATTTTGACTT | ||
| SARS-CoV-2_37_RIGHT | ATGAATGTCTTGACACTCGTTTATAA | ||
| SARS-CoV-2_38_LEFT | TGTATGCATCAGCTGTAGTGTTACT | ||
| SARS-CoV-2_38_RIGHT | ATTACTTAGTTTCTACACAGGAGTTTAGATA | ||
| SARS-CoV-2_39_LEFT | TACTTGTTACTTTGGCCTCTTTTGTTT | ||
| SARS-CoV-2_39_RIGHT | TTCCATGCAGGGTGCTGTAGAC | ||
| SARS-CoV-2_3_LEFT | AGCTGGTGGCCATAGTTACGGC | ||
| SARS-CoV-2_3_RIGHT | TTTGAAATTAAATTGGCAAAGAAATTT | ||
| SARS-CoV-2_40_LEFT | CACAATGACATTCTCTTAGCTAAAGA | ||
| SARS-CoV-2_40_RIGHT | GAGGGCAAAAGTTACTAGTGCT | ||
| SARS-CoV-2_41_LEFT | GATGCAGCCATGCAACGTAAG | ||
| SARS-CoV-2_41_RIGHT | TTAGCATGGCCTCTTATTGTAACAG | ||
| SARS-CoV-2_42_LEFT | TTTACTTATGCATCAGCATTGTGGGAA | ||
| SARS-CoV-2_42_RIGHT | GGTTTGTTACAGACACACCTAAAGG | ||
| SARS-CoV-2_43_LEFT | TGGGCTAGATTCCCTAAGAGTGATG | ||
| SARS-CoV-2_43_RIGHT | GGTGGTGCATCGTGTTGTCTGT | ||
| SARS-CoV-2_44_LEFT | AATCACTAATTGTGTTAAGATGTT | ||
| SARS-CoV-2_44_RIGHT | CTAGTACTGATGTCGTATACAG | ||
| SARS-CoV-2_45_LEFT | TGCGGTGTAAGTGCAGCCCGTC | ||
| SARS-CoV-2_45_RIGHT | ATGAAGGTAATTGTGACACATTAAAA | ||
| SARS-CoV-2_46_LEFT | GTGACATGGTACCACATATATCA | ||
| SARS-CoV-2_46_RIGHT | GTTCCTGTTGTAGATTCTTATTAT | ||
| SARS-CoV-2_47_LEFT | ACATTAGATAATCAAGATCTCAATGGTAAC | ||
| SARS-CoV-2_47_RIGHT | ATTTGTTGATGGTGTTCCATTTGTAGTTT | ||
| SARS-CoV-2_48_LEFT | TGACAGATGCATTCTGCATTGTGC | ||
| SARS-CoV-2_48_RIGHT | AAGGAAGGAAGTTCTGTTGAATTAAA | ||
| SARS-CoV-2_49_LEFT | TTTTCAAACTGTCAAACCCGGTAATTT | ||
| SARS-CoV-2_49_RIGHT | AAACGTAATGTCATCCCTACTATAACT | ||
| SARS-CoV-2_4_LEFT | CTGCCGTGAACATGAGCATGAA | ||
| SARS-CoV-2_4_RIGHT | CCAAAATGCTGTTGTTAAAATTTAT | ||
| SARS-CoV-2_50_LEFT | ATGGGGTAAGGCTAGACTTTATTATGATTC | ||
| SARS-CoV-2_50_RIGHT | TTGTTCTTGCTCGCAAACATAC | ||
| SARS-CoV-2_51_LEFT | TGGTGGTTGGCACAACATGTTAA | ||
| SARS-CoV-2_51_RIGHT | TTACAACACAGACTTTATGAGTG | ||
| SARS-CoV-2_52_LEFT | CAATGTTAATGCACTTTTATCT | ||
| SARS-CoV-2_52_RIGHT | CCTTACCCAGATCCATCAAGAATC | ||
| SARS-CoV-2_53_LEFT | CTCATGAATTTTGCTCTCAACATACA | ||
| SARS-CoV-2_53_RIGHT | GTGTTCTTTGCAATTCACAGA | ||
| SARS-CoV-2_54_LEFT | TTAACAGGACACATGTTAGACATGT | ||
| SARS-CoV-2_54_RIGHT | TGGACAAGTTTTTGGTTTATATAAA | ||
| SARS-CoV-2_55_LEFT | GTTGTGATGTCACAGATGTGAC | ||
| SARS-CoV-2_55_RIGHT | TCTTTACTGGTTATCGTGTAACTAAAAAC | ||
| SARS-CoV-2_56_LEFT | AAGTGCTGTCTGACAGAGAATT | ||
| SARS-CoV-2_56_RIGHT | CTGGTAAGAGTCATTTTGCTATT | ||
| SARS-CoV-2_57_LEFT | CAACACTCAATATCTCAGATGAGTTTT | ||
| SARS-CoV-2_57_RIGHT | GTTGTCAATGCCAGATTACGTGCT | ||
| SARS-CoV-2_58_LEFT | GACAGCAGATATAGTTGTCTTT | ||
| SARS-CoV-2_58_RIGHT | TTAACAGGCCACAAATAGGCGTG | ||
| SARS-CoV-2_59_LEFT | CATAAAGACAAATCAGCTCAATGCTTT | ||
| SARS-CoV-2_59_RIGHT | AAATTCCACGTAGGAATGTGGCAAC | ||
| SARS-CoV-2_5_LEFT | TGGCAGACGGGCGATTTTGTT | ||
| SARS-CoV-2_5_RIGHT | GAGAAAGTCAACATCAATATTGTTGGT | ||
| SARS-CoV-2_60_LEFT | TGTTGCTATTACCAGAGCAAAAGTAGGC | ||
| SARS-CoV-2_60_RIGHT | GTGTCATGCTACTAGAGAAGC | ||
| SARS-CoV-2_61_LEFT | GTTTATCACCCGCGAAGAAGCTA | ||
| SARS-CoV-2_61_RIGHT | TGAAAATAGGACCTGAGCGCACCTGTTG | ||
| SARS-CoV-2_62_LEFT | TAAAAATCTCTCTGACAGAGTCGTATTT | ||
| SARS-CoV-2_62_RIGHT | TGAAGATTAATGCGGCTTGTAGAAA | ||
| SARS-CoV-2_63_LEFT | GCTGTCCACGAGTGCTTTGTTA | ||
| SARS-CoV-2_63_RIGHT | CCTTAACTTGCCTGGTTGTGATGGT | ||
| SARS-CoV-2_64_LEFT | GAATTGCAATGTCGATAGATATCCT | ||
| SARS-CoV-2_64_RIGHT | TTACAAACAATTTGATACTTATAACCTC | ||
| SARS-CoV-2_65_LEFT | ATCATGCTAATGAGTACAGATTGTATCT | ||
| SARS-CoV-2_65_RIGHT | AGAGATGCTCCAGCACATATATCT | ||
| SARS-CoV-2_66_LEFT | AGAGGTGAAAATACTCAATAATTTGG | ||
| SARS-CoV-2_66_RIGHT | TACTTTACTCAGAGTAGAAATTTACAAGAA | ||
| SARS-CoV-2_67_LEFT | AGTCTTAATGGAGTCACATTAATTGGA | ||
| SARS-CoV-2_67_RIGHT | CTAAGTGTGTGTGTTCTGTTATTGA | ||
| SARS-CoV-2_68_LEFT | ACGTTTTAAGGAATCACCTTTTGAATTA | ||
| SARS-CoV-2_68_RIGHT | TAATGATGAATGTCGCAAAATATACT | ||
| SARS-CoV-2_69_LEFT | TATGCCTAATCTTTACAAAATG | ||
| SARS-CoV-2_69_RIGHT | AAGACTAAAAATGTTACAAAAGAAAATGAC | ||
| SARS-CoV-2_6_LEFT | CTAACATAGGTTGTAACCATAC | ||
| SARS-CoV-2_6_RIGHT | TTCTGTGCGTGTTTTACAGAAGG | ||
| SARS-CoV-2_70_LEFT | ATTGTGCAACTGTACATACAGCTAA | ||
| SARS-CoV-2_70_RIGHT | TCAGTTGTCTTCCTATTCTTTATTTGACA | ||
| SARS-CoV-2_71_LEFT | GCGAACAAATAGATGGTTATGT | ||
| SARS-CoV-2_71_RIGHT | GTTTTCAGATCCTCAGTTTTACATT | ||
| SARS-CoV-2_72_LEFT | TGTTAACAACTAAACGAACAATGTTTGTT | ||
| SARS-CoV-2_72_RIGHT | TTATTGTTAATAACGCTACTAATGTTGTT | ||
| SARS-CoV-2_73_LEFT | TTTTTGGTACTACTTTAGATTCGA | ||
| SARS-CoV-2_73_RIGHT | TATTAACATCACTAGGTTTCAAACTTT | ||
| SARS-CoV-2_74_LEFT | AGGAAAACAGGGTAATTTCAAA | ||
| SARS-CoV-2_74_RIGHT | TAGAAAAAGGAATCTATCAAACTTCTAAC | ||
| SARS-CoV-2_75_LEFT | CCATTACAGATGCTGTAGACTGTGCA | ||
| SARS-CoV-2_75_RIGHT | CCAGGGCAAACTGGAAAGAT | ||
| SARS-CoV-2_76_LEFT | CTGTCCTATATAATTCCGCATCATTTTCC | ||
| SARS-CoV-2_76_LEFT_alt1 | AGATTCATTTGTAATTAGAGGTGATGAAGTCA | ||
| SARS-CoV-2_76_RIGHT | CAATCATATGGTTTCCAACCCACTAATGG | ||
| SARS-CoV-2_76_RIGHT_alt1 | TGTTTGTGGACCTAAAAAGTC | ||
| SARS-CoV-2_77_LEFT | GAGAGAGATATTTCAACTGAAATCTATCAG | ||
| SARS-CoV-2_77_RIGHT | TGGTGGTGTCAGTGTTATAACACC | ||
| SARS-CoV-2_78_LEFT | CAAAAAGTTTCTGCCTTTCCAACAATT | ||
| SARS-CoV-2_78_RIGHT | TAGCTAGTCAATCCATCATTGCCT | ||
| SARS-CoV-2_79_LEFT | GCAGGTATATGCGCTAGTTATC | ||
| SARS-CoV-2_79_RIGHT | ACCAATTAAAGATTTTGGTGGTTTTAAT | ||
| SARS-CoV-2_79_RIGHT_alt1 | TTTACAAAACACCACCAATTAAAGATTTTG | ||
| SARS-CoV-2_7_LEFT | CTTTATGCATTTGCATCAGAGGCT | ||
| SARS-CoV-2_7_RIGHT | AATTGTCGGTGGACAAATTGTC | ||
| SARS-CoV-2_80_LEFT | ACTGGAATAGCTGTTGAACAAGA | ||
| SARS-CoV-2_80_RIGHT | ACAAATACCATTTGCTATGCAAATG | ||
| SARS-CoV-2_81_LEFT | ACTTCTGCACTGTTAGCGGGTAC | ||
| SARS-CoV-2_81_RIGHT | AGGCAGACTTCAAAGTTTGCAG | ||
| SARS-CoV-2_82_LEFT | TTAAACACGCTTGTTAAACAAC | ||
| SARS-CoV-2_82_RIGHT | ACTTTCCTCGTGAAGGTGTCTT | ||
| SARS-CoV-2_83_LEFT | TATGTCCCTGCACAAGAAAAGA | ||
| SARS-CoV-2_83_RIGHT | AAGAATTTAAATGAATCTCTCATCGATC | ||
| SARS-CoV-2_84_LEFT | GTGACATCTCTGGCATTAATGCTTC | ||
| SARS-CoV-2_84_RIGHT | AATCAAGGATGCTACTCCTTCAG | ||
| SARS-CoV-2_85_LEFT | CTCTGAGCCAGTGCTCAAAGGA | ||
| SARS-CoV-2_85_RIGHT | TTTAGTCTACTTCTTGCAGAGTATAAACT | ||
| SARS-CoV-2_86_LEFT | AACAGTTTACTCACACCTTTTGCTCGT | ||
| SARS-CoV-2_86_RIGHT | CTCAACTCAATTGAGTACAGACAC | ||
| SARS-CoV-2_87_LEFT | TGAAAAATGGGAATCTGGAGTAAAAGAC | ||
| SARS-CoV-2_87_RIGHT | TGCGCTTCGATTGTGTGCGTAC | ||
| SARS-CoV-2_88_LEFT | GAGACAGGTACGTTAATAGTTA | ||
| SARS-CoV-2_88_LEFT_alt1 | ATTCGTTTCGGAAGAGACAGGTACGT | ||
| SARS-CoV-2_88_RIGHT | AGGAATAGGTTTTTGTATATAATTAA | ||
| SARS-CoV-2_89_LEFT | AACAATGGAACCTAGTAATAGGT | ||
| SARS-CoV-2_89_LEFT_alt1 | ATTCCTTACATGGATTTGTCTTCTACAAT | ||
| SARS-CoV-2_89_RIGHT | CTTCGTATTGCTGGACACCATCT | ||
| SARS-CoV-2_89_RIGHT_alt1 | CTGGACACCATCTAGGACGCTGTGA | ||
| SARS-CoV-2_8_LEFT | AAGTTTAAGGAAGGTGTAGAGTTTCT | ||
| SARS-CoV-2_8_RIGHT | CAACCATTAGAACAACCTACTAGTGAA | ||
| SARS-CoV-2_90_LEFT | ACGTGCCACTCCATGGCACTAT | ||
| SARS-CoV-2_90_RIGHT | TAAAGTTTCCATTTGGAATCTTGATTA | ||
| SARS-CoV-2_90_RIGHT_alt1 | ACTATAGCAGAGATATTACTAATTATTATGAGG | ||
| SARS-CoV-2_91_LEFT | GTGACAATATTGCTTTGCTTGTACA | ||
| SARS-CoV-2_91_RIGHT | ATAACAAATTTGCACTGACTTGCTTT | ||
| SARS-CoV-2_92_LEFT | AGTGTGTTAGAGGTACAACAGTACTT | ||
| SARS-CoV-2_92_RIGHT | TTTTGGTTCTCACTTGAACTGCAAGATCA | ||
| SARS-CoV-2_93_LEFT | AATAGTGTTTATAACACTTTGCTTCA | ||
| SARS-CoV-2_93_RIGHT | CTAAATCACCCATTCAGTACAT | ||
| SARS-CoV-2_94_LEFT | TATTCACTTCTATTCTAAATGGTAT | ||
| SARS-CoV-2_94_RIGHT | TTTACCCAATAATACTGCGTCT | ||
| SARS-CoV-2_95_LEFT | CGTTCTATGAAGACTTTTTAGAGT | ||
| SARS-CoV-2_95_RIGHT | CTCAGTCCAAGATGGTATTTCTACTA | ||
| SARS-CoV-2_96_LEFT | ATTGGCTACTACCGAAGAGCTACC | ||
| SARS-CoV-2_96_RIGHT | GCTGGCAATGGCGGTGATGCT | ||
| SARS-CoV-2_97_LEFT | CGTAGTCGCAACAGTTCAAGAA | ||
| SARS-CoV-2_97_RIGHT | TCGGAATGTCGCGCATTGGCA | ||
| SARS-CoV-2_98_LEFT | ATCAGACAAGGAACTGATTACAAAC | ||
| SARS-CoV-2_98_RIGHT | CTCAGGCCTAAACTCATGCAGA | ||
| SARS-CoV-2_99_LEFT | CTGCAGATTTGGATGATTTCTCC | ||
| SARS-CoV-2_99_RIGHT | CATGTGATTTTAATAGCTTCTTAGGAG | ||
| SARS-CoV-2_9_LEFT | GGGAGAAACACTTCCCACAGAAGTG | ||
| SARS-CoV-2_9_RIGHT | TGAGTTCGCCTGTGTTGTGGCAGA |