{"data_server":"https://primer-monitor.neb.com/igvstatic","organism_slug":"sars-cov-2","organism_name":"SARS-CoV-2","primer_set_display_name":"ARTIC v5.3.2","primer_set_name":"ARTIC_v5.3.2"}
Name | Locus | Category | Sequence |
---|---|---|---|
SARS-CoV-2_400_10_LEFT_0 | AAGTAAATGAGTTCGCCTGTGTTGTG | ||
SARS-CoV-2_400_10_RIGHT_0 | CAGTGAGGACAATCAGACAAC | ||
SARS-CoV-2_400_11_LEFT_0 | AAGATTGGTTAGATGATGATAGTCAACAA | ||
SARS-CoV-2_400_11_RIGHT_0 | TTGTGTTTTAAGCGGACACAATCT | ||
SARS-CoV-2_400_12_LEFT_0 | GAATCTGATGATTACATAGCTACTAATGGA | ||
SARS-CoV-2_400_12_RIGHT_0 | AAGTTAAGCCATTTATAACTGAAAGTAAAC | ||
SARS-CoV-2_400_13_LEFT_0 | TAAAAATCTCTATGACAAACTTGTTTCAAGCTT | ||
SARS-CoV-2_400_13_RIGHT_0 | CTGTGGTTATACCTACTAAAAAGGCTGGTGGCA | ||
SARS-CoV-2_400_14_LEFT_0 | CATCACTTTCTTAAAGAAAGATGCTCCAT | ||
SARS-CoV-2_400_14_RIGHT_0 | TATACAGCGTAAATATAAGGGTATTAAAATA | ||
SARS-CoV-2_400_15_LEFT_0 | AGAAACACGCAAATTAATGCCT | ||
SARS-CoV-2_400_15_RIGHT_0 | GCTGGTTCCTATAAAGATTGGTCCTAT | ||
SARS-CoV-2_400_16_LEFT_0 | TTACTTCTTCTTCTAAAACACCTGAAGAACATT | ||
SARS-CoV-2_400_16_RIGHT_0 | CACATGAAGGTAAAACATTTTATGTTTTAC | ||
SARS-CoV-2_400_17_LEFT_0 | TGGTCCAACTTATTTGGATGGAGCTGA | ||
SARS-CoV-2_400_17_RIGHT_0 | TAGCCTACTGTAATAAGACAGTAGGTGAGTT | ||
SARS-CoV-2_400_18_LEFT_0 | ATGCTTATTACAGAGCAAGGGCTGGT | ||
SARS-CoV-2_400_18_RIGHT_0 | TTACTTGTGCTAGTGAGTACACTGGTAA | ||
SARS-CoV-2_400_19_LEFT_0 | TGATGTCAGCACCACCTGCTCAGTA | ||
SARS-CoV-2_400_19_RIGHT_0 | ATAATTTTAAGTTTGTATGTGATAATATCAA | ||
SARS-CoV-2_400_1_LEFT_1 | TCTGTTCTCTAAACGAACTTTAAAATCTGTG | ||
SARS-CoV-2_400_1_RIGHT_1 | AGTTGAAAAAGGCGTTTTGCCTCAACTT | ||
SARS-CoV-2_400_20_LEFT_0 | AGTTACTTATAAATTGGATGGTGTTGTTTGTA | ||
SARS-CoV-2_400_20_RIGHT_0 | CACGTATAAACCAAATACCTGGTGTATACGT | ||
SARS-CoV-2_400_21_LEFT_0 | AAATTGTTACATAAACCTATTGTTTGGCATGTT | ||
SARS-CoV-2_400_21_RIGHT_0 | CTAGTCTTACTATTAAGAAACCTAATGAATTAT | ||
SARS-CoV-2_400_22_LEFT_0 | AGAAGAGGTTGGCCACACAGATCTAAT | ||
SARS-CoV-2_400_22_RIGHT_0 | TGTCTAGAGGCTTCATTTAATTATTTGAAGTCA | ||
SARS-CoV-2_400_23_LEFT_0 | TTAAAGCATCTATGCCGACTACTATAGCAAA | ||
SARS-CoV-2_400_23_RIGHT_0 | ATGGGATTTAACTGCTTTTGGCTTAGTTGC | ||
SARS-CoV-2_400_24_LEFT_0 | TTTAGACACCTATCCTTCTTTAGAAACTATACAA | ||
SARS-CoV-2_400_24_RIGHT_0 | GAATGTACAACTATTGTTAATGGTGTT | ||
SARS-CoV-2_400_25_LEFT_0 | TAGACGGTTGTAATTCATCAACTTGT | ||
SARS-CoV-2_400_25_RIGHT_0 | TTAACTTAGACAACCTGAGAGCTAATAACAC | ||
SARS-CoV-2_400_26_LEFT_0 | TTGATAAAGCTGGTCAAAAGACTTATGAA | ||
SARS-CoV-2_400_26_RIGHT_0 | AATGTCTTATCTACTTTTATTTCAGCAGCTCGG | ||
SARS-CoV-2_400_27_LEFT_0 | ACACTAGTTGCAACTGCAGAAGCTGAA | ||
SARS-CoV-2_400_27_RIGHT_0 | ACCTTTTAAGTTGACATGTGCAACTACTAG | ||
SARS-CoV-2_400_28_LEFT_0 | TTCATGTCATTGTCTGAACAACTACGAAAA | ||
SARS-CoV-2_400_28_RIGHT_0 | GGTAGTTATACTAATGACAAAGCTT | ||
SARS-CoV-2_400_29_LEFT_0 | TTTTGCTAACAAACATGCTGATTTTGACA | ||
SARS-CoV-2_400_29_RIGHT_0 | CACACGTTATGTGCTCATGGAT | ||
SARS-CoV-2_400_2_LEFT_0 | CTTTGGAGACTCCGTGGAGGAG | ||
SARS-CoV-2_400_2_RIGHT_0 | TGATCCTTATGAAGATTTTCAAGAA | ||
SARS-CoV-2_400_30_LEFT_0 | AGATGCTTCTGGTAAGCCAGTACCATATT | ||
SARS-CoV-2_400_30_RIGHT_0 | TAGCTGGTGGTATTGTAGCTATCGTA | ||
SARS-CoV-2_400_31_LEFT_1 | AGGAGTTTTCTGTGGTGTAGATGCT | ||
SARS-CoV-2_400_31_RIGHT_0 | TAACAATTGCTTATATCATTTGTATTTCCACAA | ||
SARS-CoV-2_400_32_LEFT_0 | CTGTTATTTACTTGTACTTGACATTTTATCTTA | ||
SARS-CoV-2_400_32_RIGHT_0 | GTCATCTCGCAAAGGCTCTCAA | ||
SARS-CoV-2_400_33_LEFT_0 | CAAGTATTTTAGTGGAGCAATGGATACAACTAG | ||
SARS-CoV-2_400_33_RIGHT_0 | CTCAGGGTTATTGGACATTCTATGCAAAA | ||
SARS-CoV-2_400_34_LEFT_0 | CTCATTCGTAAGTCTAATCATAATTTCTTG | ||
SARS-CoV-2_400_34_RIGHT_0 | TATGGACCTTTTGTTGACAGGCAAACAG | ||
SARS-CoV-2_400_35_LEFT_0 | ATGCACCATATGGAATTACCAACTGGAGTT | ||
SARS-CoV-2_400_35_RIGHT_0 | CTTTATTAGAAGATGAATTTACACCTTTTG | ||
SARS-CoV-2_400_36_LEFT_0 | TATGTGTGCTTCATTAAAAGAATTACTGCAAAA | ||
SARS-CoV-2_400_36_RIGHT_0 | TTTTAATATGGTCTATATGCCTGCTAGTTGG | ||
SARS-CoV-2_400_37_LEFT_0 | ATGCATTTCTCTGTTTGTTTTTGTTACCT | ||
SARS-CoV-2_400_37_RIGHT_0 | TTGGCCAGAGGTATTGTTTTTA | ||
SARS-CoV-2_400_38_LEFT_0 | ATAATCTCTGTTACTTCTAACTACTCAGGTG | ||
SARS-CoV-2_400_38_RIGHT_0 | TCTAAAATGTCAGATGTAAAGTGCACATCAG | ||
SARS-CoV-2_400_39_LEFT_0 | TGTTGGGTGTTGGTGGCAAACCTTGT | ||
SARS-CoV-2_400_39_RIGHT_0 | TAATGGTGATTCTGAAGTTGTTCT | ||
SARS-CoV-2_400_3_LEFT_1 | TAAAGGAGCTGGTGGCCATAGTT | ||
SARS-CoV-2_400_3_RIGHT_0 | TTGAAATTAAATTGGCAAAGAAATTTGAC | ||
SARS-CoV-2_400_40_LEFT_0 | CATATGCAGCTTTTGCTACTGCTCA | ||
SARS-CoV-2_400_40_RIGHT_0 | CCAGACTATAACACATATAAAAATACGTGTGAT | ||
SARS-CoV-2_400_41_LEFT_0 | TTGTGTTCCCTTGAACATAATACCT | ||
SARS-CoV-2_400_41_RIGHT_0 | TGTACTTGCACTGTTATCCGATTTA | ||
SARS-CoV-2_400_42_LEFT_0 | CAATGCGTTAGCTTACTACAAC | ||
SARS-CoV-2_400_42_RIGHT_0 | ACCAATCACTAATTGTGTTAAGATG | ||
SARS-CoV-2_400_43_LEFT_0 | TAGATGCTGCTAAAGCTTACAAAG | ||
SARS-CoV-2_400_43_RIGHT_0 | GGGTTTGCGGTGTAAGTGCAGC | ||
SARS-CoV-2_400_44_LEFT_0 | CGAACCCATGCTTCAGTCAG | ||
SARS-CoV-2_400_44_RIGHT_0 | ACTAAATACACAATGGCAGACCTCGTCT | ||
SARS-CoV-2_400_45_LEFT_0 | GTTTAGAATAGACGGTGACATGGTACCAC | ||
SARS-CoV-2_400_45_RIGHT_0 | GTTCCTGTTGTAGATTCTTATTAT | ||
SARS-CoV-2_400_46_LEFT_0 | ACTGGTATGATTTCGGTGATTTCATAC | ||
SARS-CoV-2_400_46_RIGHT_0 | TATTTGTTGATGGTGTTCCATTTGTAGTTT | ||
SARS-CoV-2_400_47_LEFT_0 | TTATTCTCTACAGTGTTCCCACCTACAAGTTT | ||
SARS-CoV-2_400_47_RIGHT_0 | ACTTCTTCTTTGCTCAGGATGGTAATGCTG | ||
SARS-CoV-2_400_48_LEFT_0 | TGTCTAAGGGTTTCTTTAAGGAAGG | ||
SARS-CoV-2_400_48_RIGHT_0 | TATGCCATTAGTGCAAAGAATAGAGCTCGC | ||
SARS-CoV-2_400_49_LEFT_0 | ATATACAAAACGTAATGTCATCCCTACTA | ||
SARS-CoV-2_400_49_RIGHT_0 | TATAGATTAGCTAATGAGTGTGCTCAAGTA | ||
SARS-CoV-2_400_4_LEFT_0 | CTTGGTACACGGAACGTTCTGAAAA | ||
SARS-CoV-2_400_4_RIGHT_0 | AAATGCTGTTGTTAAAATTTATTGTCCAGC | ||
SARS-CoV-2_400_50_LEFT_0 | TTGCTCGCAAACATACAACGTGTT | ||
SARS-CoV-2_400_50_RIGHT_0 | GTTGTGTGTTTCAATAGCACTTATGC | ||
SARS-CoV-2_400_51_LEFT_0 | GAGTTTTACGCATATTTGCGTAAACATTT | ||
SARS-CoV-2_400_51_RIGHT_0 | TACCCACTTACTAAACATCCTAATCAGGAGT | ||
SARS-CoV-2_400_52_LEFT_2 | ATGATTGAACGGTTCGTGTCTTTAGC | ||
SARS-CoV-2_400_52_RIGHT_2 | GTTGTGATGTCACAGATGTGACT | ||
SARS-CoV-2_400_53_LEFT_0 | ACGTAGACCATTCTTATGTTGTAAAT | ||
SARS-CoV-2_400_53_RIGHT_0 | AGGAGACATTTAAACTGTCTTATGGTATT | ||
SARS-CoV-2_400_54_LEFT_1 | TGCAGCAGAAACGCTCAAAGCTA | ||
SARS-CoV-2_400_54_RIGHT_1 | ATGAGTTTTCTAGCAATGTTGCAAATTAT | ||
SARS-CoV-2_400_55_LEFT_1 | ATGTTAGAATTACTGGCTTATACCCAACACTC | ||
SARS-CoV-2_400_55_RIGHT_1 | ATAGTTGTCTTTGATGAAATTTCAATGGC | ||
SARS-CoV-2_400_56_LEFT_0 | GAAGGCATTAAAATATTTGCCTATAGATAA | ||
SARS-CoV-2_400_56_RIGHT_0 | TGCTGAAATTGTTGACACTGTG | ||
SARS-CoV-2_400_57_LEFT_0 | AACCAGAATATTTCAATTCAGTGTGTAGA | ||
SARS-CoV-2_400_57_RIGHT_0 | TATTCACTCAAACCACTGAAACAGCTC | ||
SARS-CoV-2_400_58_LEFT_0 | ACTCAAACTGTTGATTCATCACAGGG | ||
SARS-CoV-2_400_58_RIGHT_0 | TAGAAGACTCATCTCTATGATGGGTTTTAAA | ||
SARS-CoV-2_400_59_LEFT_0 | TAAATTCAAAACTGAAGGTTTATGTGTTGACA | ||
SARS-CoV-2_400_59_RIGHT_0 | GGAATGTAGTGCGTATAAAGATT | ||
SARS-CoV-2_400_5_LEFT_0 | TGAGAATTTGACTAAAGAAGGTGCCACT | ||
SARS-CoV-2_400_5_RIGHT_0 | TTAATGAAGAGATCGCCATTATTTTGGCATCT | ||
SARS-CoV-2_400_60_LEFT_0 | TCAATTTAAACACCTCATACCACT | ||
SARS-CoV-2_400_60_RIGHT_0 | AGCTAGTTGTGATGCAATCATGACT | ||
SARS-CoV-2_400_61_LEFT_0 | AAAGCAACCATGATCTGTATTGTCAA | ||
SARS-CoV-2_400_61_RIGHT_0 | TATGCCTATTTTGGAATTGCAATGT | ||
SARS-CoV-2_400_62_LEFT_2 | ACAGCCTTGTAGTGACAAAGCTTAT | ||
SARS-CoV-2_400_62_RIGHT_0 | GGTGCTGTCTGTAGACATCATGCTAA | ||
SARS-CoV-2_400_63_LEFT_0 | ATAGATTATGTACCACTAAAGTCTGCTACGTGTA | ||
SARS-CoV-2_400_63_RIGHT_0 | CATTTGAGCTTTGGGCTAAGCGCAAC | ||
SARS-CoV-2_400_64_LEFT_0 | GTTGATGTAGAATTGTTTGAAAATAAAAC | ||
SARS-CoV-2_400_64_RIGHT_0 | GTCTTAATGGAGTCACATTAATTGGAGAAG | ||
SARS-CoV-2_400_65_LEFT_0 | GTGTTCTTATTACAGAAGGTAGTGTT | ||
SARS-CoV-2_400_65_RIGHT_0 | GATTTTATTCCTATGGACAGTACAGTTAAAAAC | ||
SARS-CoV-2_400_66_LEFT_0 | TACTGATTGGACTAGCTAAACGTTTTAAGG | ||
SARS-CoV-2_400_66_RIGHT_0 | CAAAATTATGGTGATAGTGCAACATTACC | ||
SARS-CoV-2_400_67_LEFT_1 | TAGTCAAGCGTGGCAACCGGGTGTTG | ||
SARS-CoV-2_400_67_RIGHT_1 | GGGATCTCATTATTAGTGATATGTACGACCCTA | ||
SARS-CoV-2_400_68_LEFT_0 | GTGCAACTGTACATACAGCTAATAAAT | ||
SARS-CoV-2_400_68_RIGHT_0 | ATTCTTTATTTGACATGAGTAAATTTCCCC | ||
SARS-CoV-2_400_69_LEFT_0 | TGCAAATTACATATTTTGGAGGAATACAAA | ||
SARS-CoV-2_400_69_RIGHT_0 | CATTCAACTCAGGACTTGTTCTTACC | ||
SARS-CoV-2_400_6_LEFT_1 | AGAAGGTTCCGAAGGTCTTAAT | ||
SARS-CoV-2_400_6_RIGHT_1 | AGGCCGCTATAACAATACTAGATGGAA | ||
SARS-CoV-2_400_70_LEFT_0 | CTAGTCTCTAGTCAGTGTGTTAATCTTA | ||
SARS-CoV-2_400_70_RIGHT_0 | GTTGTTATTAAAGTCTGTGAATTTCAATTTTGT | ||
SARS-CoV-2_400_71_LEFT_0 | TTTTGGTACTACTTTAGATTCGAAGACC | ||
SARS-CoV-2_400_71_RIGHT_0 | GCCAATAGGTATTAACATCACTAGGTTT | ||
SARS-CoV-2_400_72_LEFT_0 | AAATATATTCTAAGCACACGCCTATTAATTTAG | ||
SARS-CoV-2_400_72_RIGHT_0 | AACAGAATCTATTGTTAGATTTCCTAATAT | ||
SARS-CoV-2_400_73_LEFT_0 | CTTCACTGTAGAAAAAGGAATCTATCAA | ||
SARS-CoV-2_400_73_RIGHT_0 | ACAGGCTGCGTTATAGCTTGGAATTCT | ||
SARS-CoV-2_400_74_LEFT_0 | AGATTCATTTGTAATTAGAGGTGATGAAGTCA | ||
SARS-CoV-2_400_74_RIGHT_0 | CTGTTTGTGGACCTAAAAAGT | ||
SARS-CoV-2_400_75_LEFT_1 | AGTAGTAGTACTTTCTTTTGAACTTCTACAT | ||
SARS-CoV-2_400_75_RIGHT_1 | GTGTTTATTCTACAGGTTCTAATGTT | ||
SARS-CoV-2_400_76_LEFT_0 | CTGCCTTTCCAACAATTTGGCAGAGACAT | ||
SARS-CoV-2_400_76_RIGHT_0 | TGTAGCTAGTCAATCCATCATT | ||
SARS-CoV-2_400_77_LEFT_0 | GCGCTAGTTATCAGACTCAGACTAAT | ||
SARS-CoV-2_400_77_RIGHT_0 | TTTACAAAACACCACCAATTAAAGATTTTG | ||
SARS-CoV-2_400_78_LEFT_0 | AGTTTTTGTACACAATTAAACCGTGCTTTA | ||
SARS-CoV-2_400_78_RIGHT_0 | GACCTTTGGTGCAGGTGCTGCA | ||
SARS-CoV-2_400_79_LEFT_0 | TTGCTCAATACACTTCTGCACTGTTAGCG | ||
SARS-CoV-2_400_79_RIGHT_0 | GGTTGATCACAGGCAGACTTCAAAG | ||
SARS-CoV-2_400_7_LEFT_2 | TTGTACGATCAATTTTCTCCCGC | ||
SARS-CoV-2_400_7_RIGHT_2 | AAGGAAATTAAGGAGAGTGTTCAGA | ||
SARS-CoV-2_400_80_LEFT_0 | AACAACTTAGCTCCAATTTTGGTGCA | ||
SARS-CoV-2_400_80_RIGHT_0 | CTTTCCTCGTGAAGGTGTCTTTGT | ||
SARS-CoV-2_400_81_LEFT_0 | ATGTCCCTGCACAAGAAAAGAAC | ||
SARS-CoV-2_400_81_RIGHT_0 | CCAAGAATTTAAATGAATCTCTCATCGATCT | ||
SARS-CoV-2_400_82_LEFT_0 | GACATCTCTGGCATTAATGCTTCAGTTGT | ||
SARS-CoV-2_400_82_RIGHT_0 | TTTGAAGCAAGGTGAAATCAAGGATGCTA | ||
SARS-CoV-2_400_83_LEFT_0 | AAACGAACTTATGGATTTGTTTATGAGAAT | ||
SARS-CoV-2_400_83_RIGHT_0 | AAGAATAATAATGAGGCTTTGGCTTTGCTGGAA | ||
SARS-CoV-2_400_84_LEFT_2 | ACTCACACCTTTTGCTCGTTGCTGCTG | ||
SARS-CoV-2_400_84_RIGHT_2 | ACTGGTGTTGAACATGTTACCTTC | ||
SARS-CoV-2_400_85_LEFT_0 | CTATTACCAGCTGTACTCAACTCAATTG | ||
SARS-CoV-2_400_85_RIGHT_0 | GTCTTGTAAAACCTTCTTTTTACGTTTAC | ||
SARS-CoV-2_400_86_LEFT_0 | GCGCTTCGATTGTGTGCGTACTG | ||
SARS-CoV-2_400_86_RIGHT_0 | AAATTGGATCACCGGTGGAATTGCTA | ||
SARS-CoV-2_400_87_LEFT_1 | TTCCTTACATGGATTTGTCTTCTACAAT | ||
SARS-CoV-2_400_87_RIGHT_1 | GACATCAAGGACCTGCCTAA | ||
SARS-CoV-2_400_88_LEFT_2 | TCGTATTGCTGGACACCATCTAG | ||
SARS-CoV-2_400_88_RIGHT_2 | TGAAGAGCAACCAATGGAGATTGATTA | ||
SARS-CoV-2_400_89_LEFT_2 | CTCGTTGACTTTCAGGTTACTATAGC | ||
SARS-CoV-2_400_89_RIGHT_0 | TCCTGACGGCGTAAAACACG | ||
SARS-CoV-2_400_8_LEFT_0 | ATTGTCGGTGGACAAATTGTCAC | ||
SARS-CoV-2_400_8_RIGHT_0 | TTGTATTAACGGGCTTATGTTGCTCG | ||
SARS-CoV-2_400_90_LEFT_0 | GCTGATAACAAATTTGCACTGACTTGCT | ||
SARS-CoV-2_400_90_RIGHT_0 | ATTTCACCAAGAATGTAGTTTAC | ||
SARS-CoV-2_400_91_LEFT_0 | TTCTCACTTGAACTGCAAGATCATAATG | ||
SARS-CoV-2_400_91_RIGHT_0 | AGAGTATCATGACGTTCGTGTTGTTTTA | ||
SARS-CoV-2_400_92_LEFT_0 | CCTTTTACAATTAATTGCCAGGAACCTAAAT | ||
SARS-CoV-2_400_92_RIGHT_0 | TTGGCTACTACCGAAGAGCTACCAGA | ||
SARS-CoV-2_400_93_LEFT_0 | GGCGTTCCAATTAACACCAA | ||
SARS-CoV-2_400_93_RIGHT_0 | ATTCAACTCCAGGCAGCAGTAGGG | ||
SARS-CoV-2_400_94_LEFT_0 | CTCTTCTCGTTCCTCATCACG | ||
SARS-CoV-2_400_94_RIGHT_0 | TCTTCGGAATGTCGCGCATTG | ||
SARS-CoV-2_400_95_LEFT_0 | ACATTGGCCGCAAATTGCACAATT | ||
SARS-CoV-2_400_95_RIGHT_0 | ACAAGGCAGATGGGCTATATA | ||
SARS-CoV-2_400_96_LEFT_1 | GGATGATTTCTCCAAACAATTGCA | ||
SARS-CoV-2_400_96_RIGHT_0 | TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAA | ||
SARS-CoV-2_400_9_LEFT_0 | CTGGTGATTTACAACCATTAGAACAACCTA | ||
SARS-CoV-2_400_9_RIGHT_0 | TTTGCAACCAGTATCTGAATTACTTACACCACT |