Primer Set: Midnight


IGV Visualization:


Download Primer Set BED
Download Sequence FASTA

Primers:

Name Locus Category Sequence
SARSCoV_1200_10_LEFT Forward TTTACCAGGAGTTTTCTGTGGTGT
SARSCoV_1200_10_RIGHT Reverse TGGGCCTCATAGCACATTGGTA
SARSCoV_1200_11_LEFT Forward AGACACCTAAGTATAAGTTTGTTCGCA
SARSCoV_1200_11_RIGHT Reverse GCCCACATGGAAATGGCTTGAT
SARSCoV_1200_12_LEFT Forward ATGGTGCTAGGAGAGTGTGGAC
SARSCoV_1200_12_RIGHT Reverse GGATTTCCCACAATGCTGATGC
SARSCoV_1200_13_LEFT Forward ACCTCTTACAACAGCAGCCAAAC
SARSCoV_1200_13_RIGHT Reverse CGTCCTTTTCTTGGAAGCGACA
SARSCoV_1200_14_LEFT Forward ACAGGCACTAGTACTGATGTCGT
SARSCoV_1200_14_RIGHT Reverse GTGCAGCTACTGAAAAGCACGT
SARSCoV_1200_15_LEFT Forward TTTTAAGGAATTACTTGTGTATGCTGCT
SARSCoV_1200_15_RIGHT Reverse ACACACAACAGCATCGTCAGAG
SARSCoV_1200_16_LEFT Forward ACAACACAGACTTTATGAGTGTCTCT
SARSCoV_1200_16_RIGHT Reverse CTCTGTCAGACAGCACTTCACG
SARSCoV_1200_17_LEFT Forward TCAAGCTTTTTGCAGCAGAAACG
SARSCoV_1200_17_RIGHT Reverse CCAAGCAGGGTTACGTGTAAGG
SARSCoV_1200_18_LEFT Forward GCACATAAAGACAAATCAGCTCAATGC
SARSCoV_1200_18_RIGHT Reverse TGTCTGAAGCAGTGGAAAAGCA
SARSCoV_1200_19_LEFT Forward GGCACATGGCTTTGAGTTGACA
SARSCoV_1200_19_RIGHT Reverse CCTGTTGTCCATCAAAGTGTCCC
SARSCoV_1200_1_LEFT Forward ACCAACCAACTTTCGATCTCTTGT
SARSCoV_1200_1_RIGHT Reverse GGTTGCATTCATTTGGTGACGC
SARSCoV_1200_20_LEFT Forward ACAATTTGATACTTATAACCTCTGGAACAC
SARSCoV_1200_20_RIGHT Reverse GATTAGGCATAGCAACACCCGG
SARSCoV_1200_21_LEFT Forward TCTGTAGTTTCTAAGGTTGTCAAAGTGA
SARSCoV_1200_21_RIGHT Reverse GCAGGGGGTAATTGAGTTCTGG
SARSCoV_1200_22_LEFT Forward GTGATGTTCTTGTTAACAACTAAACGAACA
SARSCoV_1200_22_RIGHT Reverse AACAGATGCAAATCTGGTGGCG
SARSCoV_1200_23_LEFT Forward ACTTTAGAGTCCAACCAACAGAATCT
SARSCoV_1200_23_RIGHT Reverse TGACTAGCTACACTACGTGCCC
SARSCoV_1200_24_LEFT Forward GCTGAACATGTCAACAACTCATATGA
SARSCoV_1200_24_RIGHT Reverse ATGAGGTGCTGACTGAGGGAAG
SARSCoV_1200_25_LEFT Forward TGCTGCTACTAAAATGTCAGAGTGT
SARSCoV_1200_25_RIGHT Reverse CATTTCCAGCAAAGCCAAAGCC
SARSCoV_1200_26_LEFT Forward GCCTTGAAGCCCCTTTTCTCTA
SARSCoV_1200_26_RIGHT Reverse AATGACCACATGGAACGCGTAC
SARSCoV_1200_27_LEFT Forward TGGATCACCGGTGGAATTGCTA
SARSCoV_1200_27_RIGHT Reverse TGTTCGTTTAGGCGTGACAAGT
SARSCoV_1200_28_LEFT Forward TTTGTGCTTTTTAGCCTTTCTGCT
SARSCoV_1200_28_RIGHT Reverse GTTTGGCCTTGTTGTTGTTGGC
SARSCoV_1200_29_LEFT Forward TGAGGGAGCCTTGAATACACCA
SARSCoV_1200_29_RIGHT Reverse TAGGCAGCTCTCCCTAGCATTG
SARSCoV_1200_2_LEFT Forward CCATAATCAAGACTATTCAACCAAGGGT
SARSCoV_1200_2_RIGHT Reverse ACAGGTGACAATTTGTCCACCG
SARSCoV_1200_3_LEFT Forward GGCTTGAAGAGAAGTTTAAGGAAGGT
SARSCoV_1200_3_RIGHT Reverse GATTGTCCTCACTGCCGTCTTG
SARSCoV_1200_4_LEFT Forward GGAATTTGGTGCCACTTCTGCT
SARSCoV_1200_4_RIGHT Reverse CCTGACCCGGGTAAGTGGTTAT
SARSCoV_1200_5_LEFT Forward ACCTACTAAAAAGGCTGGTGGC
SARSCoV_1200_5_RIGHT Reverse AGCATCTTGTAGAGCAGGTGGA
SARSCoV_1200_6_LEFT Forward ACTTCTATTAAATGGGCAGATAACAACTG
SARSCoV_1200_6_RIGHT Reverse GATTATCCATTCCCTGCGCGTC
SARSCoV_1200_7_LEFT Forward ACCTGGTGTATACGTTGTCTTTGG
SARSCoV_1200_7_RIGHT Reverse GCTGAAATCGGGGCCATTTGTA
SARSCoV_1200_8_LEFT Forward CAATCATGCAATTGTTTTTCAGCTATTTTG
SARSCoV_1200_8_RIGHT Reverse TGACTTTTTGCTACCTGCGCAT
SARSCoV_1200_9_LEFT Forward AGAAGTTACTGGCGATAGTTGTAATAACT
SARSCoV_1200_9_RIGHT Reverse TGCTGATATGTCCAAAGCACCA
All Primer Sets