{"data_server":"https://primer-monitor.neb.com/igvstatic","organism_slug":"sars-cov-2","organism_name":"SARS-CoV-2","primer_set_display_name":"ARTICv3","primer_set_name":"ARTICv3"}
Name | Locus | Category | Sequence |
---|---|---|---|
nCoV-2019_10_LEFT | Forward | TGAGAAGTGCTCTGCCTATACAGT | |
nCoV-2019_10_RIGHT | Reverse | TCATCTAACCAATCTTCTTCTTGCTCT | |
nCoV-2019_11_LEFT | Forward | GGAATTTGGTGCCACTTCTGCT | |
nCoV-2019_11_RIGHT | Reverse | TCATCAGATTCAACTTGCATGGCA | |
nCoV-2019_12_LEFT | Forward | AAACATGGAGGAGGTGTTGCAG | |
nCoV-2019_12_RIGHT | Reverse | TTCACTCTTCATTTCCAAAAAGCTTGA | |
nCoV-2019_13_LEFT | Forward | TCGCACAAATGTCTACTTAGCTGT | |
nCoV-2019_13_RIGHT | Reverse | ACCACAGCAGTTAAAACACCCT | |
nCoV-2019_14_LEFT | Forward | CATCCAGATTCTGCCACTCTTGT | |
nCoV-2019_14_LEFT_alt4 | Forward | TGGCAATCTTCATCCAGATTCTGC | |
nCoV-2019_14_RIGHT | Reverse | AGTTTCCACACAGACAGGCATT | |
nCoV-2019_14_RIGHT_alt2 | Reverse | TGCGTGTTTCTTCTGCATGTGC | |
nCoV-2019_15_LEFT | Forward | ACAGTGCTTAAAAAGTGTAAAAGTGCC | |
nCoV-2019_15_LEFT_alt1 | Forward | AGTGCTTAAAAAGTGTAAAAGTGCCT | |
nCoV-2019_15_RIGHT | Reverse | AACAGAAACTGTAGCTGGCACT | |
nCoV-2019_15_RIGHT_alt3 | Reverse | ACTGTAGCTGGCACTTTGAGAGA | |
nCoV-2019_16_LEFT | Forward | AATTTGGAAGAAGCTGCTCGGT | |
nCoV-2019_16_RIGHT | Reverse | CACAACTTGCGTGTGGAGGTTA | |
nCoV-2019_17_LEFT | Forward | CTTCTTTCTTTGAGAGAAGTGAGGACT | |
nCoV-2019_17_RIGHT | Reverse | TTTGTTGGAGTGTTAACAATGCAGT | |
nCoV-2019_18_LEFT | Forward | TGGAAATACCCACAAGTTAATGGTTTAAC | |
nCoV-2019_18_LEFT_alt2 | Forward | ACTTCTATTAAATGGGCAGATAACAACTGT | |
nCoV-2019_18_RIGHT | Reverse | AGCTTGTTTACCACACGTACAAGG | |
nCoV-2019_18_RIGHT_alt1 | Reverse | GCTTGTTTACCACACGTACAAGG | |
nCoV-2019_19_LEFT | Forward | GCTGTTATGTACATGGGCACACT | |
nCoV-2019_19_RIGHT | Reverse | TGTCCAACTTAGGGTCAATTTCTGT | |
nCoV-2019_1_LEFT | Forward | ACCAACCAACTTTCGATCTCTTGT | |
nCoV-2019_1_RIGHT | Reverse | CATCTTTAAGATGTTGACGTGCCTC | |
nCoV-2019_20_LEFT | Forward | ACAAAGAAAACAGTTACACAACAACCA | |
nCoV-2019_20_RIGHT | Reverse | ACGTGGCTTTATTAGTTGCATTGTT | |
nCoV-2019_21_LEFT | Forward | TGGCTATTGATTATAAACACTACACACCC | |
nCoV-2019_21_RIGHT | Reverse | TAGATCTGTGTGGCCAACCTCT | |
nCoV-2019_21_RIGHT_alt0 | Reverse | GATCTGTGTGGCCAACCTCTTC | |
nCoV-2019_22_LEFT | Forward | ACTACCGAAGTTGTAGGAGACATTATACT | |
nCoV-2019_22_RIGHT | Reverse | ACAGTATTCTTTGCTATAGTAGTCGGC | |
nCoV-2019_23_LEFT | Forward | ACAACTACTAACATAGTTACACGGTGT | |
nCoV-2019_23_RIGHT | Reverse | ACCAGTACAGTAGGTTGCAATAGTG | |
nCoV-2019_24_LEFT | Forward | AGGCATGCCTTCTTACTGTACTG | |
nCoV-2019_24_RIGHT | Reverse | ACATTCTAACCATAGCTGAAATCGGG | |
nCoV-2019_25_LEFT | Forward | GCAATTGTTTTTCAGCTATTTTGCAGT | |
nCoV-2019_25_RIGHT | Reverse | ACTGTAGTGACAAGTCTCTCGCA | |
nCoV-2019_26_LEFT | Forward | TTGTGATACATTCTGTGCTGGTAGT | |
nCoV-2019_26_RIGHT | Reverse | TCCGCACTATCACCAACATCAG | |
nCoV-2019_27_LEFT | Forward | ACTACAGTCAGCTTATGTGTCAACC | |
nCoV-2019_27_RIGHT | Reverse | AATACAAGCACCAAGGTCACGG | |
nCoV-2019_28_LEFT | Forward | ACATAGAAGTTACTGGCGATAGTTGT | |
nCoV-2019_28_RIGHT | Reverse | TGTTTAGACATGACATGAACAGGTGT | |
nCoV-2019_29_LEFT | Forward | ACTTGTGTTCCTTTTTGTTGCTGC | |
nCoV-2019_29_RIGHT | Reverse | AGTGTACTCTATAAGTTTTGATGGTGTGT | |
nCoV-2019_2_LEFT | Forward | CTGTTTTACAGGTTCGCGACGT | |
nCoV-2019_2_RIGHT | Reverse | TAAGGATCAGTGCCAAGCTCGT | |
nCoV-2019_30_LEFT | Forward | GCACAACTAATGGTGACTTTTTGCA | |
nCoV-2019_30_RIGHT | Reverse | ACCACTAGTAGATACACAAACACCAG | |
nCoV-2019_31_LEFT | Forward | TTCTGAGTACTGTAGGCACGGC | |
nCoV-2019_31_RIGHT | Reverse | ACAGAATAAACACCAGGTAAGAATGAGT | |
nCoV-2019_32_LEFT | Forward | TGGTGAATACAGTCATGTAGTTGCC | |
nCoV-2019_32_RIGHT | Reverse | AGCACATCACTACGCAACTTTAGA | |
nCoV-2019_33_LEFT | Forward | ACTTTTGAAGAAGCTGCGCTGT | |
nCoV-2019_33_RIGHT | Reverse | TGGACAGTAAACTACGTCATCAAGC | |
nCoV-2019_34_LEFT | Forward | TCCCATCTGGTAAAGTTGAGGGT | |
nCoV-2019_34_RIGHT | Reverse | AGTGAAATTGGGCCTCATAGCA | |
nCoV-2019_35_LEFT | Forward | TGTTCGCATTCAACCAGGACAG | |
nCoV-2019_35_RIGHT | Reverse | ACTTCATAGCCACAAGGTTAAAGTCA | |
nCoV-2019_36_LEFT | Forward | TTAGCTTGGTTGTACGCTGCTG | |
nCoV-2019_36_RIGHT | Reverse | GAACAAAGACCATTGAGTACTCTGGA | |
nCoV-2019_37_LEFT | Forward | ACACACCACTGGTTGTTACTCAC | |
nCoV-2019_37_RIGHT | Reverse | GTCCACACTCTCCTAGCACCAT | |
nCoV-2019_38_LEFT | Forward | ACTGTGTTATGTATGCATCAGCTGT | |
nCoV-2019_38_RIGHT | Reverse | CACCAAGAGTCAGTCTAAAGTAGCG | |
nCoV-2019_39_LEFT | Forward | AGTATTGCCCTATTTTCTTCATAACTGGT | |
nCoV-2019_39_RIGHT | Reverse | TGTAACTGGACACATTGAGCCC | |
nCoV-2019_3_LEFT | Forward | CGGTAATAAAGGAGCTGGTGGC | |
nCoV-2019_3_RIGHT | Reverse | AAGGTGTCTGCAATTCATAGCTCT | |
nCoV-2019_40_LEFT | Forward | TGCACATCAGTAGTCTTACTCTCAGT | |
nCoV-2019_40_RIGHT | Reverse | CATGGCTGCATCACGGTCAAAT | |
nCoV-2019_41_LEFT | Forward | GTTCCCTTCCATCATATGCAGCT | |
nCoV-2019_41_RIGHT | Reverse | TGGTATGACAACCATTAGTTTGGCT | |
nCoV-2019_42_LEFT | Forward | TGCAAGAGATGGTTGTGTTCCC | |
nCoV-2019_42_RIGHT | Reverse | CCTACCTCCCTTTGTTGTGTTGT | |
nCoV-2019_43_LEFT | Forward | TACGACAGATGTCTTGTGCTGC | |
nCoV-2019_43_RIGHT | Reverse | AGCAGCATCTACAGCAAAAGCA | |
nCoV-2019_44_LEFT | Forward | TGCCACAGTACGTCTACAAGCT | |
nCoV-2019_44_LEFT_alt3 | Forward | CCACAGTACGTCTACAAGCTGG | |
nCoV-2019_44_RIGHT | Reverse | AACCTTTCCACATACCGCAGAC | |
nCoV-2019_44_RIGHT_alt0 | Reverse | CGCAGACGGTACAGACTGTGTT | |
nCoV-2019_45_LEFT | Forward | TACCTACAACTTGTGCTAATGACCC | |
nCoV-2019_45_LEFT_alt2 | Forward | AGTATGTACAAATACCTACAACTTGTGCT | |
nCoV-2019_45_RIGHT | Reverse | AAATTGTTTCTTCATGTTGGTAGTTAGAGA | |
nCoV-2019_45_RIGHT_alt7 | Reverse | TTCATGTTGGTAGTTAGAGAAAGTGTGTC | |
nCoV-2019_46_LEFT | Forward | TGTCGCTTCCAAGAAAAGGACG | |
nCoV-2019_46_LEFT_alt1 | Forward | CGCTTCCAAGAAAAGGACGAAGA | |
nCoV-2019_46_RIGHT | Reverse | CACGTTCACCTAAGTTGGCGTA | |
nCoV-2019_46_RIGHT_alt2 | Reverse | CACGTTCACCTAAGTTGGCGTAT | |
nCoV-2019_47_LEFT | Forward | AGGACTGGTATGATTTTGTAGAAAACCC | |
nCoV-2019_47_RIGHT | Reverse | AATAACGGTCAAAGAGTTTTAACCTCTC | |
nCoV-2019_48_LEFT | Forward | TGTTGACACTGACTTAACAAAGCCT | |
nCoV-2019_48_RIGHT | Reverse | TAGATTACCAGAAGCAGCGTGC | |
nCoV-2019_49_LEFT | Forward | AGGAATTACTTGTGTATGCTGCTGA | |
nCoV-2019_49_RIGHT | Reverse | TGACGATGACTTGGTTAGCATTAATACA | |
nCoV-2019_4_LEFT | Forward | GGTGTATACTGCTGCCGTGAAC | |
nCoV-2019_4_RIGHT | Reverse | CACAAGTAGTGGCACCTTCTTTAGT | |
nCoV-2019_50_LEFT | Forward | GTTGATAAGTACTTTGATTGTTACGATGGT | |
nCoV-2019_50_RIGHT | Reverse | TAACATGTTGTGCCAACCACCA | |
nCoV-2019_51_LEFT | Forward | TCAATAGCCGCCACTAGAGGAG | |
nCoV-2019_51_RIGHT | Reverse | AGTGCATTAACATTGGCCGTGA | |
nCoV-2019_52_LEFT | Forward | CATCAGGAGATGCCACAACTGC | |
nCoV-2019_52_RIGHT | Reverse | GTTGAGAGCAAAATTCATGAGGTCC | |
nCoV-2019_53_LEFT | Forward | AGCAAAATGTTGGACTGAGACTGA | |
nCoV-2019_53_RIGHT | Reverse | AGCCTCATAAAACTCAGGTTCCC | |
nCoV-2019_54_LEFT | Forward | TGAGTTAACAGGACACATGTTAGACA | |
nCoV-2019_54_RIGHT | Reverse | AACCAAAAACTTGTCCATTAGCACA | |
nCoV-2019_55_LEFT | Forward | ACTCAACTTTACTTAGGAGGTATGAGCT | |
nCoV-2019_55_RIGHT | Reverse | GGTGTACTCTCCTATTTGTACTTTACTGT | |
nCoV-2019_56_LEFT | Forward | ACCTAGACCACCACTTAACCGA | |
nCoV-2019_56_RIGHT | Reverse | ACACTATGCGAGCAGAAGGGTA | |
nCoV-2019_57_LEFT | Forward | ATTCTACACTCCAGGGACCACC | |
nCoV-2019_57_RIGHT | Reverse | GTAATTGAGCAGGGTCGCCAAT | |
nCoV-2019_58_LEFT | Forward | TGATTTGAGTGTTGTCAATGCCAGA | |
nCoV-2019_58_RIGHT | Reverse | CTTTTCTCCAAGCAGGGTTACGT | |
nCoV-2019_59_LEFT | Forward | TCACGCATGATGTTTCATCTGCA | |
nCoV-2019_59_RIGHT | Reverse | AAGAGTCCTGTTACATTTTCAGCTTG | |
nCoV-2019_5_LEFT | Forward | TGGTGAAACTTCATGGCAGACG | |
nCoV-2019_5_RIGHT | Reverse | ATTGATGTTGACTTTCTCTTTTTGGAGT | |
nCoV-2019_60_LEFT | Forward | TGATAGAGACCTTTATGACAAGTTGCA | |
nCoV-2019_60_RIGHT | Reverse | GGTACCAACAGCTTCTCTAGTAGC | |
nCoV-2019_61_LEFT | Forward | TGTTTATCACCCGCGAAGAAGC | |
nCoV-2019_61_RIGHT | Reverse | ATCACATAGACAACAGGTGCGC | |
nCoV-2019_62_LEFT | Forward | GGCACATGGCTTTGAGTTGACA | |
nCoV-2019_62_RIGHT | Reverse | GTTGAACCTTTCTACAAGCCGC | |
nCoV-2019_63_LEFT | Forward | TGTTAAGCGTGTTGACTGGACT | |
nCoV-2019_63_RIGHT | Reverse | ACAAACTGCCACCATCACAACC | |
nCoV-2019_64_LEFT | Forward | TCGATAGATATCCTGCTAATTCCATTGT | |
nCoV-2019_64_RIGHT | Reverse | AGTCTTGTAAAAGTGTTCCAGAGGT | |
nCoV-2019_65_LEFT | Forward | GCTGGCTTTAGCTTGTGGGTTT | |
nCoV-2019_65_RIGHT | Reverse | TGTCAGTCATAGAACAAACACCAATAGT | |
nCoV-2019_66_LEFT | Forward | GGGTGTGGACATTGCTGCTAAT | |
nCoV-2019_66_RIGHT | Reverse | TCAATTTCCATTTGACTCCTGGGT | |
nCoV-2019_67_LEFT | Forward | GTTGTCCAACAATTACCTGAAACTTACT | |
nCoV-2019_67_RIGHT | Reverse | CAACCTTAGAAACTACAGATAAATCTTGGG | |
nCoV-2019_68_LEFT | Forward | ACAGGTTCATCTAAGTGTGTGTGT | |
nCoV-2019_68_RIGHT | Reverse | CTCCTTTATCAGAACCAGCACCA | |
nCoV-2019_69_LEFT | Forward | TGTCGCAAAATATACTCAACTGTGTCA | |
nCoV-2019_69_RIGHT | Reverse | TCTTTATAGCCACGGAACCTCCA | |
nCoV-2019_6_LEFT | Forward | GGTGTTGTTGGAGAAGGTTCCG | |
nCoV-2019_6_RIGHT | Reverse | TAGCGGCCTTCTGTAAAACACG | |
nCoV-2019_70_LEFT | Forward | ACAAAAGAAAATGACTCTAAAGAGGGTTT | |
nCoV-2019_70_RIGHT | Reverse | TGACCTTCTTTTAAAGACATAACAGCAG | |
nCoV-2019_71_LEFT | Forward | ACAAATCCAATTCAGTTGTCTTCCTATTC | |
nCoV-2019_71_RIGHT | Reverse | TGGAAAAGAAAGGTAAGAACAAGTCCT | |
nCoV-2019_72_LEFT | Forward | ACACGTGGTGTTTATTACCCTGAC | |
nCoV-2019_72_RIGHT | Reverse | ACTCTGAACTCACTTTCCATCCAAC | |
nCoV-2019_73_LEFT | Forward | CAATTTTGTAATGATCCATTTTTGGGTGT | |
nCoV-2019_73_RIGHT | Reverse | CACCAGCTGTCCAACCTGAAGA | |
nCoV-2019_74_LEFT | Forward | ACATCACTAGGTTTCAAACTTTACTTGC | |
nCoV-2019_74_RIGHT | Reverse | GCAACACAGTTGCTGATTCTCTTC | |
nCoV-2019_75_LEFT | Forward | AGAGTCCAACCAACAGAATCTATTGT | |
nCoV-2019_75_RIGHT | Reverse | ACCACCAACCTTAGAATCAAGATTGT | |
nCoV-2019_76_LEFT | Forward | AGGGCAAACTGGAAAGATTGCT | |
nCoV-2019_76_LEFT_alt3 | Forward | GGGCAAACTGGAAAGATTGCTGA | |
nCoV-2019_76_RIGHT | Reverse | ACACCTGTGCCTGTTAAACCAT | |
nCoV-2019_76_RIGHT_alt0 | Reverse | ACCTGTGCCTGTTAAACCATTGA | |
nCoV-2019_77_LEFT | Forward | CCAGCAACTGTTTGTGGACCTA | |
nCoV-2019_77_RIGHT | Reverse | CAGCCCCTATTAAACAGCCTGC | |
nCoV-2019_78_LEFT | Forward | CAACTTACTCCTACTTGGCGTGT | |
nCoV-2019_78_RIGHT | Reverse | TGTGTACAAAAACTGCCATATTGCA | |
nCoV-2019_79_LEFT | Forward | GTGGTGATTCAACTGAATGCAGC | |
nCoV-2019_79_RIGHT | Reverse | CATTTCATCTGTGAGCAAAGGTGG | |
nCoV-2019_7_LEFT | Forward | ATCAGAGGCTGCTCGTGTTGTA | |
nCoV-2019_7_LEFT_alt0 | Forward | CATTTGCATCAGAGGCTGCTCG | |
nCoV-2019_7_RIGHT | Reverse | TGCACAGGTGACAATTTGTCCA | |
nCoV-2019_7_RIGHT_alt5 | Reverse | AGGTGACAATTTGTCCACCGAC | |
nCoV-2019_80_LEFT | Forward | TTGCCTTGGTGATATTGCTGCT | |
nCoV-2019_80_RIGHT | Reverse | TGGAGCTAAGTTGTTTAACAAGCG | |
nCoV-2019_81_LEFT | Forward | GCACTTGGAAAACTTCAAGATGTGG | |
nCoV-2019_81_RIGHT | Reverse | GTGAAGTTCTTTTCTTGTGCAGGG | |
nCoV-2019_82_LEFT | Forward | GGGCTATCATCTTATGTCCTTCCCT | |
nCoV-2019_82_RIGHT | Reverse | TGCCAGAGATGTCACCTAAATCAA | |
nCoV-2019_83_LEFT | Forward | TCCTTTGCAACCTGAATTAGACTCA | |
nCoV-2019_83_RIGHT | Reverse | TTTGACTCCTTTGAGCACTGGC | |
nCoV-2019_84_LEFT | Forward | TGCTGTAGTTGTCTCAAGGGCT | |
nCoV-2019_84_RIGHT | Reverse | AGGTGTGAGTAAACTGTTACAAACAAC | |
nCoV-2019_85_LEFT | Forward | ACTAGCACTCTCCAAGGGTGTT | |
nCoV-2019_85_RIGHT | Reverse | ACACAGTCTTTTACTCCAGATTCCC | |
nCoV-2019_86_LEFT | Forward | TCAGGTGATGGCACAACAAGTC | |
nCoV-2019_86_RIGHT | Reverse | ACGAAAGCAAGAAAAAGAAGTACGC | |
nCoV-2019_87_LEFT | Forward | CGACTACTAGCGTGCCTTTGTA | |
nCoV-2019_88_LEFT | Forward | CCATGGCAGATTCCAACGGTAC | |
nCoV-2019_88_RIGHT | Reverse | TGGTCAGAATAGTGCCATGGAGT | |
nCoV-2019_89_LEFT | Forward | GTACGCGTTCCATGTGGTCATT | |
nCoV-2019_89_LEFT_alt2 | Forward | CGCGTTCCATGTGGTCATTCAA | |
nCoV-2019_89_RIGHT | Reverse | ACCTGAAAGTCAACGAGATGAAACA | |
nCoV-2019_89_RIGHT_alt4 | Reverse | ACGAGATGAAACATCTGTTGTCACT | |
nCoV-2019_8_LEFT | Forward | AGAGTTTCTTAGAGACGGTTGGGA | |
nCoV-2019_8_RIGHT | Reverse | GCTTCAACAGCTTCACTAGTAGGT | |
nCoV-2019_90_LEFT | Forward | ACACAGACCATTCCAGTAGCAGT | |
nCoV-2019_90_RIGHT | Reverse | TGAAATGGTGAATTGCCCTCGT | |
nCoV-2019_91_LEFT | Forward | TCACTACCAAGAGTGTGTTAGAGGT | |
nCoV-2019_91_RIGHT | Reverse | TTCAAGTGAGAACCAAAAGATAATAAGCA | |
nCoV-2019_92_LEFT | Forward | TTTGTGCTTTTTAGCCTTTCTGCT | |
nCoV-2019_92_RIGHT | Reverse | AGGTTCCTGGCAATTAATTGTAAAAGG | |
nCoV-2019_93_LEFT | Forward | TGAGGCTGGTTCTAAATCACCCA | |
nCoV-2019_93_RIGHT | Reverse | AGGTCTTCCTTGCCATGTTGAG | |
nCoV-2019_94_LEFT | Forward | GGCCCCAAGGTTTACCCAATAA | |
nCoV-2019_94_RIGHT | Reverse | TTTGGCAATGTTGTTCCTTGAGG | |
nCoV-2019_95_LEFT | Forward | TGAGGGAGCCTTGAATACACCA | |
nCoV-2019_95_RIGHT | Reverse | CAGTACGTTTTTGCCGAGGCTT | |
nCoV-2019_96_LEFT | Forward | GCCAACAACAACAAGGCCAAAC | |
nCoV-2019_96_RIGHT | Reverse | TAGGCTCTGTTGGTGGGAATGT | |
nCoV-2019_97_LEFT | Forward | TGGATGACAAAGATCCAAATTTCAAAGA | |
nCoV-2019_97_RIGHT | Reverse | ACACACTGATTAAAGATTGCTATGTGAG | |
nCoV-2019_98_LEFT | Forward | AACAATTGCAACAATCCATGAGCA | |
nCoV-2019_98_RIGHT | Reverse | TTCTCCTAAGAAGCTATTAAAATCACATGG | |
nCoV-2019_9_LEFT | Forward | TCCCACAGAAGTGTTAACAGAGGA | |
nCoV-2019_9_LEFT_alt4 | Forward | TTCCCACAGAAGTGTTAACAGAGG | |
nCoV-2019_9_RIGHT | Reverse | ATGACAGCATCTGCCACAACAC | |
nCoV-2019_9_RIGHT_alt2 | Reverse | GACAGCATCTGCCACAACACAG |