Primer Set: MasonMar2022

Organism: SARS-CoV-2
Amp. Method: LAMP

IGV Visualization:


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Primers:

Name Locus Category Sequence
B1c-4 Orf1ab4 BIP AGCTGTTTTGCAGAGTGGTT
B2-4 Orf1ab4 BIP CCATACAACCCTCAACTTTA
B3-2 Orf1ab2 B3 AGTGTAGTTGTACCACAAGTT
B3-4 Orf1ab4 B3 AGTGTAGTTGTACCACAAGT
BIPe-2 Orf1ab2 BIP AACCTCTATCACCTCAGCTGTTTTTGTACCATACAACCCT
BIPe-4 Orf1ab4 BIP AGCTGTTTTGCAGAGTGGTTCCATACAACCCTCAACTTTA
F1c-4 Orf1ab4 FIP TTGTGGTGGTTGGTAAAGAACATC
F2-4 Orf1ab4 FIP TCATCTCGCAAAGGCT
F3-2 Orf1ab2 F3 CAGAGAAGCTGCTTGTTG
F3-4 Orf1ab4 F3 ACAACTAGCTACAGAGAAGC
FIPe-2 Orf1ab2 FIP TGGTGGTTGGTAAAGAACATCAGCATCTCGCAAAGGCTCT
FIPe-4 Orf1ab4 FIP TTGTGGTGGTTGGTAAAGAACATCTCATCTCGCAAAGGCT
LB-2 Orf1ab2 LB GAAAAATGGCATTCCCATC
LB-4 Orf1ab4 LB GAAAAATGGCATTCCCATC
LF-2 Orf1ab2 LF ACCTGAGTTACTGAAGTCA
LF-4 Orf1ab4 LF ACCTGAGTTACTGAAGTCA
N2-B1c N1 BIP AGCTGTTTTGCAGAGTGGTT
N2-B2 N1 BIP CCATACAACCCTCAACTTTA
N2-B3 N1 B3 GCTTATTCAGCAAAATGACTTG
N2-BIP N1 BIP CGCGCATTGGCATGGAAGGGATCTTTGTCATCCAATTTGA
N2-F1c N1 FIP TTGTGGTGGTTGGTAAAGAACATC
N2-F2 N1 FIP TCATCTCGCAAAGGCT
N2-F3 N1 F3 GACGTGGTCCAGAACAAAC
N2-FIP N1 FIP AGAACGCTGAAGCGCTGGGGACCAGGAACTAATCAGAC
N2-LB N1 LB TCACACCTTCGGGAACGTG
N2-LF N1 LF GGCCAATGTTTGTAATCAGTTC
All Primer Sets