{"data_server":"https://primer-monitor.neb.com/igvstatic","organism_taxid":2697049,"organism_name":"SARS-CoV-2","reference_accession":"NC_045512.2","primer_set_display_name":"VarSkip 1a","primer_set_name":"VarSkip_1a"}
Name | Locus | Category | Sequence |
---|---|---|---|
varskip-0317-1_1_LEFT | Forward | GGTAACAAACCAACCAACTTTCGA | |
varskip-0317-1_2_LEFT | Forward | GGCTTAGTAGAAGTTGAAAAAGGCG | |
varskip-0317-1_1_RIGHT | Reverse | CACCAAGTGTCTCACCACTACG | |
varskip-0317-1_3_LEFT | Forward | CCTGATGGCTACCCTCTTGAGT | |
varskip-0317-1_2_RIGHT | Reverse | AACGTTCCGTGTACCAAGCAAT | |
varskip-0317-1_4_LEFT | Forward | AAGCCACTTGCGAATTTTGTGG | |
varskip-0317-1_3_RIGHT | Reverse | ATTCGGCAAGACTATGCTCAGG | |
varskip-0317-1_5_LEFT | Forward | GGCATCTTTTTCTGCTTCCACA | |
varskip-0317-1_4_RIGHT | Reverse | TCTGTTCACCAATATTCCAGGCA | |
varskip-0317-1_6_LEFT | Forward | CTACATTACAGGTGGTGTTGTTCAG | |
varskip-0317-1_5_RIGHT | Reverse | CCACCGACAATTTCACAAGCAC | |
varskip-0317-1_7_LEFT | Forward | TCTTCTTAGAGGGAGAAACACTTCC | |
varskip-0317-1_6_RIGHT | Reverse | ATTTCGAGCAACATAAGCCCGT | |
varskip-0317-1_8_LEFT | Forward | TCTGAATTACTTACACCACTGGGC | |
varskip-0317-1_7_RIGHT | Reverse | ACCTTCTTCTTCATCCTCATCTGG | |
varskip-0317-1_9_LEFT | Forward | AGACTATTGAAGTGAATAGTTTTAGTGGT | |
varskip-0317-1_8_RIGHT | Reverse | TTTAAGGCTCCTGCAACACCTC | |
varskip-0317-1_10_LEFT | Forward | AGTTTGTGTAGATACTGTTCGCACA | |
varskip-0317-1_9_RIGHT | Reverse | TCAGTTATAAATGGCTTAACTTCCTCTT | |
varskip-0317-1_11_LEFT | Forward | ACCTACTAAAAAGGCTGGTGGC | |
varskip-0317-1_10_RIGHT | Reverse | AGGCACTTTTACACTTTTTAAGCACT | |
varskip-0317-1_12_LEFT | Forward | ACTCTTGTTACAATGCCACTTGG | |
varskip-0317-1_11_RIGHT | Reverse | GAAGAAGTAAGATAACCATTATACGCTGT | |
varskip-0317-1_13_LEFT | Forward | CGCAAGTTGTGGACATGTCAAT | |
varskip-0317-1_12_RIGHT | Reverse | AGTACTCAAAAGCCTCAACACGT | |
varskip-0317-1_14_LEFT | Forward | ACCTGCTCTACAAGATGCTTATTACA | |
varskip-0317-1_13_RIGHT | Reverse | TGTGCCCATGTACATAACAGCT | |
varskip-0317-1_15_LEFT | Forward | ACTTTGTATTGCATAGACGGTGC | |
varskip-0317-1_14_RIGHT | Reverse | TTTCTGTACAAACAACACCATCCAA | |
varskip-0317-1_16_LEFT | Forward | TTGTTACATAAACCTATTGTTTGGCATG | |
varskip-0317-1_15_RIGHT | Reverse | GCGTCCTCTGACTTCAGTACAT | |
varskip-0317-1_17_LEFT | Forward | TGTAGACAATTCTAGTCTTACTATTAAGAAACC | |
varskip-0317-1_16_RIGHT | Reverse | AAGGCATATAATTAGTACAAACACGGT | |
varskip-0317-1_18_LEFT | Forward | TCAACCGCTGCTTTAGGTGTTT | |
varskip-0317-1_17_RIGHT | Reverse | ACCACTAAGACAAACACTACAAGGT | |
varskip-0317-1_19_LEFT | Forward | TGGTTAGAATGTACATCTTCTTTGCA | |
varskip-0317-1_18_RIGHT | Reverse | AGACATAAAAGGACCTTCTAACACCAT | |
varskip-0317-1_20_LEFT | Forward | AGACAACCTGAGAGCTAATAACACT | |
varskip-0317-1_19_RIGHT | Reverse | ATCAGACACTAATGCCTGATCTAGT | |
varskip-0317-1_21_LEFT | Forward | TCTGACATAGAAGTTACTGGCGAT | |
varskip-0317-1_20_RIGHT | Reverse | ACGTTCCATATCAAAGCAATGTTGT | |
varskip-0317-1_22_LEFT | Forward | AGGATACAAGGCTATTGATGGTGG | |
varskip-0317-1_21_RIGHT | Reverse | GCAATCAATGGGCAAGCTTTGT | |
varskip-0317-1_23_LEFT | Forward | TGAAAGTTTACGCCCTGACACA | |
varskip-0317-1_22_RIGHT | Reverse | TCTGATCTTTCACAAGTGCCGT | |
varskip-0317-1_24_LEFT | Forward | GGTGAATACAGTCATGTAGTTGCC | |
varskip-0317-1_23_RIGHT | Reverse | AGGTGTGAACATAACCATCCACT | |
varskip-0317-1_25_LEFT | Forward | TGCGTAGTGATGTGCTATTACCT | |
varskip-0317-1_24_RIGHT | Reverse | AACCACTCTGCAAAACAGCTGA | |
varskip-0317-1_26_LEFT | Forward | TGTTCAACTCAGGGTTATTGGACA | |
varskip-0317-1_25_RIGHT | Reverse | TGGTGAACCATTGTAACAAGCTAAC | |
varskip-0317-1_27_LEFT | Forward | GGAGACAGGTGGTTTCTCAATCG | |
varskip-0317-1_26_RIGHT | Reverse | AAACGGCAATTCCAGTTTGAGC | |
varskip-0317-1_28_LEFT | Forward | GCCTTTTTACCTTTTGCTATGGGT | |
varskip-0317-1_27_RIGHT | Reverse | TCCAACCATGTCATAATACGCATCA | |
varskip-0317-1_29_LEFT | Forward | GATGGTGCTAGGAGAGTGTGGA | |
varskip-0317-1_28_RIGHT | Reverse | CGGTTGAGTAAACAAAAGAGGCC | |
varskip-0317-1_30_LEFT | Forward | ATTGTTGGGTGTTGGTGGCAAA | |
varskip-0317-1_29_RIGHT | Reverse | TGGACACATTGAGCCCACAATT | |
varskip-0317-1_31_LEFT | Forward | GTTGAAGAAGTCTTTGAATGTGGCT | |
varskip-0317-1_30_RIGHT | Reverse | GCATAGCACTAGTAACTTTTGCCC | |
varskip-0317-1_32_LEFT | Forward | CATGGCCTCTTATTGTAACAGCTT | |
varskip-0317-1_31_RIGHT | Reverse | GCTAACGCATTGTCATCAGTGC | |
varskip-0317-1_33_LEFT | Forward | AGAAGTGCCTGCCAATTCAACT | |
varskip-0317-1_32_RIGHT | Reverse | ATTGCCTGACCAGTACCAGTGT | |
varskip-0317-1_34_LEFT | Forward | GTAAGTGCAGCCCGTCTTACAC | |
varskip-0317-1_33_RIGHT | Reverse | CGTCCTTTTCTTGGAAGCGACA | |
varskip-0317-1_35_LEFT | Forward | ACTTGTCACATACAATTGTTGTGATGA | |
varskip-0317-1_34_RIGHT | Reverse | TCGCATGGCATCACAGAATTGT | |
varskip-0317-1_36_LEFT | Forward | ACCGTTATTTTAAATATTGGGATCAGACA | |
varskip-0317-1_35_RIGHT | Reverse | ACAAATATTTTTCTCACTAGTGGTCCA | |
varskip-0317-1_37_LEFT | Forward | TGTTGCTTTTCAAACTGTCAAACC | |
varskip-0317-1_36_RIGHT | Reverse | ACAAATAGTAGTTGTCTGATATCACACAT | |
varskip-0317-1_38_LEFT | Forward | TGAATCTTAAGTATGCCATTAGTGCAA | |
varskip-0317-1_37_RIGHT | Reverse | TGCTTGTTCCAATTACTACAGTAGCT | |
varskip-0317-1_39_LEFT | Forward | TGTGTGGCGGTTCACTATATGT | |
varskip-0317-1_38_RIGHT | Reverse | AAAGTCTGTGTTGTAAATTGCGGA | |
varskip-0317-1_40_LEFT | Forward | GACCTCATGAATTTTGCTCTCAACA | |
varskip-0317-1_39_RIGHT | Reverse | AGCTAAAGACACGAACCGTTCA | |
varskip-0317-1_41_LEFT | Forward | AAGATGTGGTGCTTGCATACGT | |
varskip-0317-1_40_RIGHT | Reverse | GCTCATACCTCCTAAGTAAAGTTGAGT | |
varskip-0317-1_42_LEFT | Forward | GCTACTGTACGTGAAGTGCTGT | |
varskip-0317-1_41_RIGHT | Reverse | ACAACAGCATCACCATAGTCACC | |
varskip-0317-1_43_LEFT | Forward | GCAAAAGTATTCTACACTCCAGGGA | |
varskip-0317-1_42_RIGHT | Reverse | CAAAACACTCTACACGAGCACG | |
varskip-0317-1_44_LEFT | Forward | AGGGCACACTAGAACCAGAATATT | |
varskip-0317-1_43_RIGHT | Reverse | TTGAGCTGATTTGTCTTTATGTGCT | |
varskip-0317-1_45_LEFT | Forward | ACAGCTCACTCTTGTAATGTAAACAG | |
varskip-0317-1_44_RIGHT | Reverse | AGTCCTGTTACATTTTCAGCTTGTAA | |
varskip-0317-1_46_LEFT | Forward | CGAGGGGTGTCATGCTACTAGA | |
varskip-0317-1_45_RIGHT | Reverse | GCGGTGGTTTAGCACTAACTCT | |
varskip-0317-1_47_LEFT | Forward | CCTGTTGGCATCATTCTATTGGATT | |
varskip-0317-1_46_RIGHT | Reverse | ACACCTAGTCATGATTGCATCACA | |
varskip-0317-1_48_LEFT | Forward | GATGCACAGCCTTGTAGTGACA | |
varskip-0317-1_47_RIGHT | Reverse | ACCATCACAACCAGGCAAGTTA | |
varskip-0317-1_49_LEFT | Forward | TGTAGACATCATGCTAATGAGTACAGA | |
varskip-0317-1_48_RIGHT | Reverse | CATCAAAGTGTCCCTTATTTACAACATT | |
varskip-0317-1_50_LEFT | Forward | GCTCCAGCACATATATCTACTATTGGT | |
varskip-0317-1_49_RIGHT | Reverse | AACACTACCTTCTGTAATAAGAACACC | |
varskip-0317-1_51_LEFT | Forward | AGTCATAGTCAGTTAGGTGGTTTACA | |
varskip-0317-1_50_RIGHT | Reverse | AGATGAACCTGTTTGCGCATCT | |
varskip-0317-1_52_LEFT | Forward | CCTAAAGGCATAATGATGAATGTCGC | |
varskip-0317-1_51_RIGHT | Reverse | AAAACAGCTGTACCTGGTGCAA | |
varskip-0317-1_53_LEFT | Forward | TGCTGATCTTTATAAGCTCATGGGA | |
varskip-0317-1_52_RIGHT | Reverse | TTTGCATGCATGACATAACCATCT | |
varskip-0317-1_54_LEFT | Forward | GTTCTTGTTAACAACTAAACGAACAATGT | |
varskip-0317-1_53_RIGHT | Reverse | CAAGTAACATTGGAAAAGAAAGGTAAGAA | |
varskip-0317-1_55_LEFT | Forward | ACGCTACTAATGTTGTTATTAAAGTCTGT | |
varskip-0317-1_54_RIGHT | Reverse | CCCTGTTTTCCTTCAAGGTCCA | |
varskip-0317-1_56_LEFT | Forward | TGCAGCTTATTATGTGGGTTATCTTC | |
varskip-0317-1_55_RIGHT | Reverse | AGAAGTTTGATAGATTCCTTTTTCTACAGT | |
varskip-0317-1_57_LEFT | Forward | TGCAGATTCATTTGTAATTAGAGGTGA | |
varskip-0317-1_56_RIGHT | Reverse | AATTACCACCAACCTTAGAATCAAGATT | |
varskip-0317-1_58_LEFT | Forward | CCAGCAACTGTTTGTGGACCTA | |
varskip-0317-1_57_RIGHT | Reverse | TCAAGTGTCTGTGGATCACGGA | |
varskip-0317-1_59_LEFT | Forward | TGTGACATACCCATTGGTGCAG | |
varskip-0317-1_58_RIGHT | Reverse | TGGGTATGGCAATAGAGTTATTAGAGT | |
varskip-0317-1_60_LEFT | Forward | ACCAGATCCATCAAAACCAAGCA | |
varskip-0317-1_59_RIGHT | Reverse | GGCCGTTAAACTTTTGTGCACA | |
varskip-0317-1_61_LEFT | Forward | TTCTTCCACAGCAAGTGCACTT | |
varskip-0317-1_60_RIGHT | Reverse | AATTTGCACTTCAGCCTCAACTT | |
varskip-0317-1_62_LEFT | Forward | AACTGCTCCTGCCATTTGTCAT | |
varskip-0317-1_61_RIGHT | Reverse | ACAACATCACAGTTACCAGACACA | |
varskip-0317-1_63_LEFT | Forward | GGAAAGTATGAGCAGTATATAAAATGGCC | |
varskip-0317-1_62_RIGHT | Reverse | ACTGGCTCAGAGTCGTCTTCAT | |
varskip-0317-1_64_LEFT | Forward | ATCATAACCCTCAAAAAGAGATGGC | |
varskip-0317-1_63_RIGHT | Reverse | ACAAAGTTTATACTCTGCAAGAAGTAGAC | |
varskip-0317-1_65_LEFT | Forward | AAATGGGAATCTGGAGTAAAAGACTG | |
varskip-0317-1_64_RIGHT | Reverse | CGTCGATTGTGTGAATTTGGACA | |
varskip-0317-1_66_LEFT | Forward | TGTGTGCGTACTGCTGCAATAT | |
varskip-0317-1_65_RIGHT | Reverse | CATGGCTAAAATTAAAGTTCCAAACAGA | |
varskip-0317-1_67_LEFT | Forward | TAGCTTGTTTTGTGCTTGCTGC | |
varskip-0317-1_66_RIGHT | Reverse | TTCTAGAAGCGGTCTGGTCAGA | |
varskip-0317-1_68_LEFT | Forward | TAGCAGGTGACTCAGGTTTTGC | |
varskip-0317-1_67_RIGHT | Reverse | TCCAAATGGAAACTTTAAAAGTCCTCA | |
varskip-0317-1_69_LEFT | Forward | AGGGCAATTCACCATTTCATCCT | |
varskip-0317-1_68_RIGHT | Reverse | ACTTCCTCTTGTCTGATGAACAGT | |
varskip-0317-1_70_LEFT | Forward | CTTTTGGTTCTCACTTGAACTGCA | |
varskip-0317-1_69_RIGHT | Reverse | GCACAATTCAATTAAAGGTGCTGAT | |
varskip-0317-1_71_LEFT | Forward | AGAGTATCATGACGTTCGTGTTGT | |
varskip-0317-1_70_RIGHT | Reverse | GGGGCCGACGTTGTTTTGAT | |
varskip-0317-1_72_LEFT | Forward | GCTGGACTTCCCTATGGTGCTA | |
varskip-0317-1_71_RIGHT | Reverse | CTCTGCTCCCTTCTGCGTAGAA | |
varskip-0317-1_73_LEFT | Forward | GCCACTAAAGCATACAATGTAACACA | |
varskip-0317-1_72_RIGHT | Reverse | ACATTCCGAAGAACGCTGAAGC | |
varskip-0317-1_74_LEFT | Forward | ACACAGGTGCCATCAAATTGGA | |
varskip-0317-1_73_RIGHT | Reverse | TTGTGCTATGTAGTTACGAGAATTCAT | |
varskip-0317-1_74_RIGHT | Reverse | GCACTACTAAAATTAATTTTACACATTAGGGC |